Gene details

Annotation of co-expression genes

PH01001381G0470's details annotation

1.Annotation

ICBR annotation: transporter, monovalent cation:proton antiporter-2 family, putative, expressed

Blast result AT2G19600 : 7.30E-88
Blast annotation: K+ efflux antiporter 4

2.Location

Scaffold: PH01001381
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000972	solute:hydrogen antiporter activity, GT31 GlycosylTransferases cation transport, rRNA methyltransferase activity, magnesium_ion_transport rRNA processing, transmembrane transport, magnesium_ion_transmembrane_transporter_activity galactosyltransferase activity, protein glycosylation,
coexpression network	CFinderM001617	Golgi organization, mRNA_surveillance_pathway solute:hydrogen antiporter activity, integral to membrane,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00999.20	Na_H_Exchanger	72	192

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0006812	cation transport
GO:0015299	solute:hydrogen antiporter activity
GO:0016021	integral to membrane
GO:0055085	transmembrane transport

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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