Gene details

Annotation of co-expression genes

PH01001390G0430's details annotation

1.Annotation

ICBR annotation: glycosyl hydrolase, putative, expressed

Blast result AT5G24090 : 2.00E-102
Blast annotation: chitinase A

2.Location

Scaffold: PH01001390
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000386	C2H2 Transcription_Regulator(from PlantTFDB) GH18 Glycoside_Hydrolases protein neddylation, Tify Transcription_Regulator(from iTAK)
coexpression network	CFinderM000699	GH18 Glycoside_Hydrolases Amino_sugar_and_nucleotide_sugar_metabolism hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, nitrogen compound metabolic process, cellular protein modification process,
coexpression network	CFinderM000943	NAC Transcription_Regulator(from PlantTFDB) GH18 Glycoside_Hydrolases catalytic activity, carbohydrate metabolic process, Amino_sugar_and_nucleotide_sugar_metabolism regulation of transcription, DNA-dependent,
coexpression network	CFinderM001071	GH18 Glycoside_Hydrolases Amino_sugar_and_nucleotide_sugar_metabolism hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, nitrogen compound metabolic process, cellular protein modification process,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
Glycoside_Hydrolases	GH18

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00704.27	Glyco_hydro_18	21	279

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Amino sugar and nucleotide sugar metabolism	chitinase [EC:3.2.1.14]	ko00520	K01183

10.Gene Ontology

GO Accession	GO Annotation
GO:0003824	catalytic activity
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975	carbohydrate metabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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