PH01001401G0270's details annotation
1.Annotation
ICBR annotation: IQ calmodulin-binding motif family protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001401
Strand: +
| Region | Start | End |
| gene | 186431 | 190927 |
| mRNA | 186431 | 190927 |
| exon | 186431 | 187472 |
| exon | 187555 | 187825 |
| exon | 188226 | 188445 |
| exon | 188774 | 188828 |
| exon | 188905 | 189036 |
| exon | 189898 | 190927 |
| CDS | 187389 | 187472 |
| CDS | 187555 | 187825 |
| CDS | 188226 | 188445 |
| CDS | 188774 | 188828 |
| CDS | 188905 | 189036 |
| CDS | 189898 | 190563 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13178.5 | DUF4005 | 355 | 395 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.