PH01001405G0290's details annotation
1.Annotation
ICBR annotation: type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed
Blast result AT2G32010 : 4.60E-71
Blast annotation: CVP2 like 1
2.Location
Scaffold: PH01001405
Strand: +
| Region | Start | End |
| gene | 198557 | 202784 |
| mRNA | 198557 | 202784 |
| exon | 198557 | 198659 |
| exon | 199097 | 199144 |
| exon | 199245 | 199332 |
| exon | 199496 | 199529 |
| exon | 199585 | 199639 |
| exon | 199945 | 200022 |
| exon | 200175 | 200335 |
| exon | 200569 | 200673 |
| exon | 200774 | 201274 |
| exon | 201469 | 201604 |
| exon | 202180 | 202328 |
| exon | 202381 | 202784 |
| CDS | 198657 | 198659 |
| CDS | 199097 | 199144 |
| CDS | 199245 | 199332 |
| CDS | 199496 | 199529 |
| CDS | 199585 | 199639 |
| CDS | 199945 | 200022 |
| CDS | 200175 | 200335 |
| CDS | 200569 | 200673 |
| CDS | 200774 | 201274 |
| CDS | 201469 | 201604 |
| CDS | 202180 | 202328 |
| CDS | 202381 | 202648 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0046856 | phosphatidylinositol dephosphorylation |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.