PH01001426G0110's details annotation
1.Annotation
ICBR annotation: emp24/gp25L/p24 family protein, putative, expressed
Blast result AT5G01010 : 1.70E-13
Blast annotation: -
2.Location
Scaffold: PH01001426
Strand: +
| Region | Start | End |
| gene | 66645 | 71480 |
| mRNA | 66645 | 71480 |
| exon | 66645 | 67589 |
| exon | 68197 | 68232 |
| exon | 69818 | 69895 |
| exon | 70461 | 70535 |
| exon | 71088 | 71480 |
| CDS | 67545 | 67589 |
| CDS | 68197 | 68232 |
| CDS | 69818 | 69895 |
| CDS | 70461 | 70535 |
| CDS | 71088 | 71156 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000297 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006810 | transport |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.