PH01001431G0110's details annotation
1.Annotation
ICBR annotation: oxidoreductase, aldo/keto reductase family protein, putative, expressed
Blast result AT1G04420 : 5.20E-38
Blast annotation: NAD(P)-linked oxidoreductase superfamily protein
2.Location
Scaffold: PH01001431
Strand: -
| Region | Start | End |
| gene | 97407 | 102009 |
| mRNA | 97407 | 102009 |
| exon | 97407 | 97774 |
| exon | 97864 | 97918 |
| exon | 98005 | 98069 |
| exon | 98181 | 98287 |
| exon | 98459 | 98523 |
| exon | 98607 | 98708 |
| exon | 98784 | 98892 |
| exon | 98995 | 99051 |
| exon | 99233 | 99295 |
| exon | 99794 | 99893 |
| exon | 99975 | 102009 |
| CDS | 97614 | 97774 |
| CDS | 97864 | 97918 |
| CDS | 98005 | 98069 |
| CDS | 98181 | 98287 |
| CDS | 98459 | 98523 |
| CDS | 98607 | 98708 |
| CDS | 98784 | 98892 |
| CDS | 98995 | 99051 |
| CDS | 99233 | 99295 |
| CDS | 99794 | 99893 |
| CDS | 99975 | 100035 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00248.20 | Aldo_ket_red | 17 | 176 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.