Gene details

Annotation of co-expression genes

PH01001440G0020's details annotation

1.Annotation

ICBR annotation: glycosyl hydrolase family 10 protein, putative, expressed

Blast result AT1G10050 : 0.00E+00
Blast annotation: glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein

2.Location

Scaffold: PH01001440
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001150	CBM22 Carbohydrate-Binding_Modules GH10 Glycoside_Hydrolases nucleosome,
coexpression network	CFinderM001193	HRT Transcription_Regulator(from iTAK) HRT-like Transcription_Regulator(from PlantTFDB) GH10 Glycoside_Hydrolases CBM22 Carbohydrate-Binding_Modules hydrolase activity, acting on glycosyl bonds, galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, integral to membrane,
coexpression network	CFinderM001430	HRT Transcription_Regulator(from iTAK) HRT-like Transcription_Regulator(from PlantTFDB) GH10 Glycoside_Hydrolases CBM22 Carbohydrate-Binding_Modules hydrolase activity, acting on glycosyl bonds,
coexpression network	CFinderM001688	CBM22 Carbohydrate-Binding_Modules GH10 Glycoside_Hydrolases CMGC_MAPK (from iTAK)
coexpression network	CFinderM001710	membrane, CBM22 Carbohydrate-Binding_Modules GH10 Glycoside_Hydrolases hydrolase activity, acting on glycosyl bonds, hydrogen-translocating pyrophosphatase activity, transporter activity, inorganic diphosphatase activity, proton transport, transport, isoprenoid biosynthetic process, Terpenoid_backbone_biosynthesis Oxidative_phosphorylation
coexpression network	CFinderM001817	GH10 Glycoside_Hydrolases CBM22 Carbohydrate-Binding_Modules

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
Carbohydrate-Binding_Modules	CBM22
Glycoside_Hydrolases	GH10

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003824	catalytic activity
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975	carbohydrate metabolic process
GO:0016798	hydrolase activity, acting on glycosyl bonds

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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