Gene details

Annotation of co-expression genes

PH01001450G0370's details annotation

1.Annotation

ICBR annotation: pentatricopeptide repeat domain containing protein, putative, expressed

Blast result AT3G16890 : 3.00E-154
Blast annotation: pentatricopeptide (PPR) domain protein 40

2.Location

Scaffold: PH01001450
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000051	Stilbenoid,_diarylheptanoid_and_gingerol_biosynthesis protein neddylation, steroid biosynthetic process, Flavonoid_biosynthesis cellular protein modification process, transferase activity, transferring acyl groups other than amino-acyl groups, small protein activating enzyme activity, 3-beta-hydroxy-delta5-steroid dehydrogenase activity,
coexpression network	CFinderM001022	IWS1 Transcription_Regulator(from iTAK) protein neddylation, cellular protein modification process, Ubiquitin_mediated_proteolysis transcription, DNA-dependent, small protein activating enzyme activity,
coexpression network	CFinderM001110	Ubiquitin_mediated_proteolysis acid-amino acid ligase activity, protein neddylation, cellular protein modification process, small protein activating enzyme activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005515	protein binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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