PH01001472G0160's details annotation
1.Annotation
ICBR annotation: protein kinase family protein, putative, expressed
Blast result AT2G45910 : 2.00E-40
Blast annotation: U-box domain-containing protein kinase family protein
2.Location
Scaffold: PH01001472
Strand: -
| Region | Start | End |
| gene | 127078 | 130400 |
| mRNA | 127078 | 130400 |
| exon | 127078 | 127857 |
| exon | 128040 | 128162 |
| exon | 128225 | 128693 |
| exon | 129520 | 129629 |
| exon | 129741 | 129889 |
| exon | 129945 | 130400 |
| CDS | 127201 | 127857 |
| CDS | 128040 | 128162 |
| CDS | 128225 | 128693 |
| CDS | 129520 | 129629 |
| CDS | 129741 | 129889 |
| CDS | 129945 | 130143 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.