PH01001475G0440's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G43020 : 0.00E+00
Blast annotation: polyamine oxidase 2
2.Location
Scaffold: PH01001475
Strand: +
| Region | Start | End |
| gene | 283485 | 289392 |
| mRNA | 283485 | 289392 |
| exon | 283485 | 284376 |
| exon | 286532 | 286644 |
| exon | 286741 | 286829 |
| exon | 286946 | 287059 |
| exon | 287450 | 287563 |
| exon | 287650 | 287737 |
| exon | 287825 | 287910 |
| exon | 287997 | 288099 |
| exon | 288206 | 288303 |
| exon | 288422 | 288827 |
| exon | 288916 | 289392 |
| CDS | 284364 | 284376 |
| CDS | 286532 | 286644 |
| CDS | 286741 | 286829 |
| CDS | 286946 | 287059 |
| CDS | 287450 | 287563 |
| CDS | 287650 | 287737 |
| CDS | 287825 | 287910 |
| CDS | 287997 | 288099 |
| CDS | 288206 | 288303 |
| CDS | 288422 | 288827 |
| CDS | 288916 | 289236 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01593.23 | Amino_oxidase | 27 | 476 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.