PH01001478G0290's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G22750 : 1.40E-24
Blast annotation: -
2.Location
Scaffold: PH01001478
Strand: +
| Region | Start | End |
| gene | 235136 | 237916 |
| mRNA | 235136 | 237916 |
| exon | 235136 | 235825 |
| exon | 236635 | 236686 |
| exon | 237315 | 237388 |
| exon | 237479 | 237568 |
| exon | 237600 | 237916 |
| CDS | 235698 | 235825 |
| CDS | 236635 | 236686 |
| CDS | 237315 | 237388 |
| CDS | 237479 | 237568 |
| CDS | 237600 | 237723 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07343.10 | DUF1475 | 1 | 116 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.