PH01001486G0290's details annotation
1.Annotation
ICBR annotation: S-locus-like receptor protein kinase, putative
Blast result AT2G19130 : 5.30E-75
Blast annotation: S-locus lectin protein kinase family protein
2.Location
Scaffold: PH01001486
Strand: +
| Region | Start | End |
| gene | 162200 | 166103 |
| mRNA | 162200 | 166103 |
| exon | 162200 | 163292 |
| exon | 163680 | 163892 |
| exon | 164477 | 165200 |
| exon | 165258 | 166103 |
| CDS | 162643 | 163292 |
| CDS | 163680 | 163892 |
| CDS | 164477 | 165200 |
| CDS | 165258 | 165716 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01453.23 | B_lectin | 82 | 173 |
| PF08276.10 | PAN_2 | 330 | 358 |
| PF00069.24 | Pkinase | 477 | 656 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
| GO:0048544 | recognition of pollen |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.