PH01001488G0310's details annotation
1.Annotation
ICBR annotation: glycine-rich protein, putative, expressed
Blast result AT5G11700 : 1.20E-99
Blast annotation: -
2.Location
Scaffold: PH01001488
Strand: +
| Region | Start | End |
| gene | 255731 | 261235 |
| mRNA | 255731 | 261235 |
| exon | 255731 | 258294 |
| exon | 258877 | 259043 |
| exon | 259697 | 259905 |
| exon | 260499 | 260618 |
| exon | 260983 | 261235 |
| CDS | 257474 | 258294 |
| CDS | 258877 | 259043 |
| CDS | 259697 | 259905 |
| CDS | 260499 | 260618 |
| CDS | 260983 | 261114 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000110 | |
| coexpression network | CFinderM000550 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.