PH01001493G0140's details annotation
1.Annotation
ICBR annotation: CAMK_CAMK_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001493
Strand: +
| Region | Start | End |
| gene | 97028 | 102186 |
| mRNA | 97028 | 102186 |
| exon | 97028 | 98403 |
| exon | 98946 | 99113 |
| exon | 99743 | 99851 |
| exon | 100460 | 100581 |
| exon | 101205 | 102186 |
| CDS | 98374 | 98403 |
| CDS | 98946 | 99113 |
| CDS | 99743 | 99851 |
| CDS | 100460 | 100581 |
| CDS | 101205 | 101216 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13499.5 | EF-hand_7 | 23 | 101 |
| PF00025.20 | Arf | 110 | 144 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005509 | calcium ion binding |
| GO:0005525 | GTP binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.