PH01001496G0370's details annotation
1.Annotation
ICBR annotation: potassium transporter, putative, expressed
Blast result AT1G60160 : 0.00E+00
Blast annotation: Potassium transporter family protein
2.Location
Scaffold: PH01001496
Strand: +
| Region | Start | End |
| gene | 238870 | 245523 |
| mRNA | 238870 | 245523 |
| exon | 238870 | 239952 |
| exon | 240310 | 240538 |
| exon | 240656 | 240904 |
| exon | 241024 | 241074 |
| exon | 241244 | 241504 |
| exon | 241957 | 242009 |
| exon | 242129 | 242243 |
| exon | 242357 | 242611 |
| exon | 242871 | 245523 |
| CDS | 239620 | 239952 |
| CDS | 240310 | 240538 |
| CDS | 240656 | 240904 |
| CDS | 241024 | 241074 |
| CDS | 241244 | 241504 |
| CDS | 241957 | 242009 |
| CDS | 242129 | 242243 |
| CDS | 242357 | 242611 |
| CDS | 242871 | 243919 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02705.15 | K_trans | 122 | 695 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0015079 | potassium ion transmembrane transporter activity |
| GO:0016020 | membrane |
| GO:0071805 | potassium ion transmembrane transport |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.