PH01001498G0450's details annotation
1.Annotation
ICBR annotation: amine oxidase, flavin-containing, domain containing protein, expressed
Blast result AT5G13700 : 3.30E-92
Blast annotation: polyamine oxidase 1
2.Location
Scaffold: PH01001498
Strand: +
| Region | Start | End |
| gene | 284365 | 288028 |
| mRNA | 284365 | 288028 |
| exon | 284365 | 285163 |
| exon | 285283 | 285392 |
| exon | 286134 | 286389 |
| exon | 286710 | 286853 |
| exon | 286978 | 287127 |
| exon | 287274 | 287531 |
| exon | 287656 | 287737 |
| exon | 287819 | 288028 |
| CDS | 285035 | 285163 |
| CDS | 285283 | 285392 |
| CDS | 286134 | 286389 |
| CDS | 286710 | 286853 |
| CDS | 286978 | 287127 |
| CDS | 287274 | 287531 |
| CDS | 287656 | 287737 |
| CDS | 287819 | 287898 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01593.23 | Amino_oxidase | 106 | 384 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.