PH01001506G0280's details annotation
1.Annotation
ICBR annotation: uncharacterized glycosyltransferase, putative, expressed
Blast result AT4G01970 : 0.00E+00
Blast annotation: stachyose synthase
2.Location
Scaffold: PH01001506
Strand: -
| Region | Start | End |
| gene | 145773 | 148829 |
| mRNA | 145773 | 148829 |
| exon | 145773 | 146487 |
| exon | 146658 | 147421 |
| exon | 147541 | 147709 |
| exon | 147750 | 148011 |
| exon | 148135 | 148829 |
| CDS | 145918 | 146487 |
| CDS | 146658 | 147421 |
| CDS | 147541 | 147709 |
| CDS | 147750 | 148011 |
| CDS | 148135 | 148769 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Glycoside_Hydrolases | GH36 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05691.11 | Raffinose_syn | 27 | 783 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Galactose metabolism | stachyose synthetase [EC:2.4.1.67] | ko00052 | K06611 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.