PH01001507G0410's details annotation
1.Annotation
ICBR annotation: protein transport protein-related, putative, expressed
Blast result AT1G63300 : 2.00E-154
Blast annotation: Myosin heavy chain-related protein
2.Location
Scaffold: PH01001507
Strand: +
| Region | Start | End |
| gene | 219192 | 226570 |
| mRNA | 219192 | 226570 |
| exon | 219192 | 219694 |
| exon | 219816 | 220010 |
| exon | 220097 | 220222 |
| exon | 220335 | 220387 |
| exon | 220638 | 220773 |
| exon | 221039 | 223102 |
| exon | 223636 | 223757 |
| exon | 223859 | 224047 |
| exon | 225182 | 226570 |
| CDS | 219617 | 219694 |
| CDS | 219816 | 220010 |
| CDS | 220097 | 220222 |
| CDS | 220335 | 220387 |
| CDS | 220638 | 220773 |
| CDS | 221039 | 223102 |
| CDS | 223636 | 223757 |
| CDS | 223859 | 224047 |
| CDS | 225182 | 225692 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10358.8 | NT-C2 | 14 | 140 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.