PH01001509G0440's details annotation
1.Annotation
ICBR annotation: protein kinase domain containing protein, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001509
Strand: -
| Region | Start | End |
| gene | 280979 | 283487 |
| mRNA | 280979 | 283487 |
| exon | 280979 | 281589 |
| exon | 283036 | 283487 |
| CDS | 281462 | 281589 |
| CDS | 283036 | 283402 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000700 | GH63 Glycoside_Hydrolases RLK-Pelle_RLCK-XIII (from iTAK) oligosaccharide metabolic process, ubiquinone biosynthetic process, tRNA methylation, tRNA (guanine-N1-)-methyltransferase activity, mannosyl-oligosaccharide glucosidase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, monooxygenase activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 63 | 123 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.