PH01001521G0030's details annotation
1.Annotation
ICBR annotation: GTPase-activating protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001521
Strand: -
| Region | Start | End |
| gene | 21046 | 27241 |
| mRNA | 21046 | 27241 |
| exon | 21046 | 23405 |
| exon | 23575 | 23698 |
| exon | 26696 | 26814 |
| exon | 26986 | 27241 |
| CDS | 23301 | 23405 |
| CDS | 23575 | 23698 |
| CDS | 26696 | 26814 |
| CDS | 26986 | 27144 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001563 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01412.17 | ArfGap | 42 | 95 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008060 | ARF GTPase activator activity |
| GO:0008270 | zinc ion binding |
| GO:0032312 | regulation of ARF GTPase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.