PH01001546G0150's details annotation
1.Annotation
ICBR annotation: targeting protein for Xklp2, putative, expressed
Blast result AT1G54460 : 7.00E-12
Blast annotation: TPX2 (targeting protein for Xklp2) protein family
2.Location
Scaffold: PH01001546
Strand: -
| Region | Start | End |
| gene | 129062 | 135848 |
| mRNA | 129062 | 135848 |
| exon | 129062 | 129941 |
| exon | 130740 | 130850 |
| exon | 131988 | 132059 |
| exon | 133009 | 135848 |
| CDS | 129672 | 129941 |
| CDS | 130740 | 130850 |
| CDS | 131988 | 132059 |
| CDS | 133009 | 133440 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06886.10 | TPX2 | 143 | 189 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.