PH01001548G0270's details annotation
1.Annotation
ICBR annotation: phosphatidylserine synthase, putative, expressed
Blast result AT1G15110 : 1.00E-115
Blast annotation: phosphatidyl serine synthase family protein
2.Location
Scaffold: PH01001548
Strand: -
| Region | Start | End |
| gene | 171015 | 175281 |
| mRNA | 171015 | 175281 |
| exon | 171015 | 171398 |
| exon | 171689 | 171824 |
| exon | 171866 | 171941 |
| exon | 172513 | 172623 |
| exon | 172895 | 172986 |
| exon | 173418 | 173502 |
| exon | 173617 | 173733 |
| exon | 173823 | 173902 |
| exon | 174002 | 174056 |
| exon | 174223 | 174313 |
| exon | 174846 | 175281 |
| CDS | 171245 | 171398 |
| CDS | 171689 | 171824 |
| CDS | 171866 | 171941 |
| CDS | 172513 | 172623 |
| CDS | 172895 | 172986 |
| CDS | 173418 | 173502 |
| CDS | 173617 | 173733 |
| CDS | 173823 | 173902 |
| CDS | 174002 | 174056 |
| CDS | 174223 | 174313 |
| CDS | 174846 | 174898 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03034.14 | PSS | 23 | 310 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006659 | phosphatidylserine biosynthetic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.