PH01001558G0210's details annotation
1.Annotation
ICBR annotation: monogalactosyldiacylglycerol synthase, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001558
Strand: +
| Region | Start | End |
| gene | 162639 | 172455 |
| mRNA | 162639 | 172455 |
| exon | 162639 | 162755 |
| exon | 163596 | 163863 |
| exon | 164029 | 164230 |
| exon | 164542 | 164749 |
| exon | 165090 | 165164 |
| exon | 165391 | 165457 |
| exon | 165720 | 165783 |
| exon | 167985 | 168052 |
| exon | 168133 | 168213 |
| exon | 168331 | 168399 |
| exon | 169480 | 169543 |
| exon | 170425 | 170479 |
| exon | 171888 | 171987 |
| exon | 172105 | 172455 |
| CDS | 162753 | 162755 |
| CDS | 163596 | 163863 |
| CDS | 164029 | 164230 |
| CDS | 164542 | 164749 |
| CDS | 165090 | 165164 |
| CDS | 165391 | 165457 |
| CDS | 165720 | 165783 |
| CDS | 167985 | 168052 |
| CDS | 168133 | 168213 |
| CDS | 168331 | 168399 |
| CDS | 169480 | 169543 |
| CDS | 170425 | 170479 |
| CDS | 171888 | 171987 |
| CDS | 172105 | 172247 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03765.14 | CRAL_TRIO_N | 78 | 119 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.