Annotation of co-expression genes

PH01001567G0130's details annotation

1.Annotation

ICBR annotation: transcription factor like protein, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01001567
Strand: -

RegionStartEnd
gene8909392345
mRNA8909392345
exon8909390078
exon9035592345
CDS8932990078
CDS9035590360

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
PF13837.5Myb_DNA-bind_4235

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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