PH01001587G0080's details annotation
1.Annotation
ICBR annotation: glycosyltransferase, putative, expressed
Blast result AT4G02500 : 0.00E+00
Blast annotation: UDP-xylosyltransferase 2
2.Location
Scaffold: PH01001587
Strand: -
| Region | Start | End |
| gene | 59949 | 65850 |
| mRNA | 59949 | 65850 |
| exon | 59949 | 61427 |
| exon | 62875 | 63034 |
| exon | 64147 | 64157 |
| exon | 64512 | 65850 |
| CDS | 60051 | 61427 |
| CDS | 62875 | 63034 |
| CDS | 64147 | 64157 |
| CDS | 64512 | 64814 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| GlycosylTransferases | GT34 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05637.11 | Glyco_transf_34 | 307 | 546 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
| GO:0016758 | transferase activity, transferring hexosyl groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.