PH01001596G0130's details annotation
1.Annotation
ICBR annotation: extra-large G-protein-related, putative, expressed
Blast result AT3G61670 : 5.40E-72
Blast annotation: Protein of unknown function (DUF3133)
2.Location
Scaffold: PH01001596
Strand: +
| Region | Start | End |
| gene | 115685 | 124686 |
| mRNA | 115685 | 124686 |
| exon | 115685 | 118852 |
| exon | 118896 | 119128 |
| exon | 121044 | 123003 |
| exon | 124264 | 124324 |
| exon | 124398 | 124686 |
| CDS | 118785 | 118852 |
| CDS | 118896 | 119128 |
| CDS | 121044 | 123003 |
| CDS | 124264 | 124324 |
| CDS | 124398 | 124637 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF11331.7 | zinc_ribbon_12 | 479 | 522 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.