PH01001599G0240's details annotation
1.Annotation
ICBR annotation: bifunctional protein folD, putative, expressed
Blast result AT4G00620 : 1.00E-139
Blast annotation: Amino acid dehydrogenase family protein
2.Location
Scaffold: PH01001599
Strand: -
| Region | Start | End |
| gene | 157795 | 163125 |
| mRNA | 157795 | 163125 |
| exon | 157795 | 158097 |
| exon | 158946 | 159113 |
| exon | 159193 | 159429 |
| exon | 159996 | 160321 |
| exon | 161008 | 163125 |
| CDS | 157927 | 158097 |
| CDS | 158946 | 159113 |
| CDS | 159193 | 159429 |
| CDS | 159996 | 160321 |
| CDS | 161008 | 161215 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00763.22 | THF_DHG_CYH | 80 | 196 |
| PF02882.18 | THF_DHG_CYH_C | 199 | 364 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity |
| GO:0009396 | folic acid-containing compound biosynthetic process |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.