PH01001615G0240's details annotation
1.Annotation
ICBR annotation: glutathione S-transferase, putative, expressed
Blast result AT1G69920 : 2.70E-44
Blast annotation: glutathione S-transferase TAU 12
2.Location
Scaffold: PH01001615
Strand: +
| Region | Start | End |
| gene | 151340 | 152902 |
| mRNA | 151340 | 152902 |
| exon | 151340 | 152100 |
| exon | 152195 | 152902 |
| CDS | 151744 | 152100 |
| CDS | 152195 | 152578 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000543 | GT1 GlycosylTransferases zinc ion transmembrane transporter activity, metal ion transmembrane transporter activity, zinc_ion_transmembrane_transport |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02798.19 | GST_N | 18 | 89 |
| PF13410.5 | GST_C_2 | 134 | 209 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.