Gene details

Annotation of co-expression genes

PH01001618G0330's details annotation

1.Annotation

ICBR annotation: CK1_CaseinKinase_1.6 - CK1 includes the casein kinase 1 kinases, expressed

Blast result AT1G03930 : 2.00E-168
Blast annotation: dual specificity kinase 1

2.Location

Scaffold: PH01001618
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000635	CK1_CK1 (from iTAK) regulation of cell shape, cell division, SNARE_interactions_in_vesicular_transport Pyrimidine_metabolism
coexpression network	CFinderM000778	CK1_CK1 (from iTAK) RLK-Pelle_LRR-XV (from iTAK) protein phosphorylation, protein serine/threonine kinase activity, protein kinase activity, transferase activity, transferring phosphorus-containing groups, ATP binding,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00069.24	Pkinase	10	228

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0004672	protein kinase activity
GO:0004674	protein serine/threonine kinase activity
GO:0005524	ATP binding
GO:0006468	protein phosphorylation
GO:0016772	transferase activity, transferring phosphorus-containing groups

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.