PH01001635G0340's details annotation
1.Annotation
ICBR annotation: OsFBX136 - F-box domain containing protein
Blast result AT3G28410 : 5.30E-16
Blast annotation: F-box/RNI-like superfamily protein
2.Location
Scaffold: PH01001635
Strand: -
| Region | Start | End |
| gene | 211683 | 214550 |
| mRNA | 211683 | 214550 |
| exon | 211683 | 212657 |
| exon | 212709 | 212879 |
| exon | 213173 | 214550 |
| CDS | 212421 | 212657 |
| CDS | 212709 | 212879 |
| CDS | 213173 | 214024 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00646.32 | F-box | 20 | 56 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.