Gene details

Annotation of co-expression genes

PH01001641G0030's details annotation

1.Annotation

ICBR annotation: GTPase-activating protein, putative, expressed

Blast result AT2G37550 : 6.50E-45
Blast annotation: ARF-GAP domain 7

2.Location

Scaffold: PH01001641
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000709	ADP_binding defense response, RLK-Pelle_LRK10L-2 (from iTAK) tryptophanyl-tRNA aminoacylation, Aminoacyl-tRNA_biosynthesis tryptophan-tRNA ligase activity, cullin-RING ubiquitin ligase complex, regulation of ARF GTPase activity,
coexpression network	CFinderM000710	RLK-Pelle_LRK10L-2 (from iTAK) cullin-RING ubiquitin ligase complex, regulation of ARF GTPase activity,
coexpression network	CFinderM000917	defense response, Terpenoid_backbone_biosynthesis isopentenyl-diphosphate delta-isomerase activity, ADP_binding regulation of ARF GTPase activity, isoprenoid biosynthetic process, ARF GTPase activator activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0008060	ARF GTPase activator activity
GO:0008270	zinc ion binding
GO:0032312	regulation of ARF GTPase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.