PH01001653G0190's details annotation
1.Annotation
ICBR annotation: DIRP family protein, putative, expressed
Blast result AT3G21430 : 7.60E-64
Blast annotation: DNA binding
2.Location
Scaffold: PH01001653
Strand: -
| Region | Start | End |
| gene | 117572 | 123111 |
| mRNA | 117572 | 123111 |
| exon | 117572 | 118434 |
| exon | 119063 | 119281 |
| exon | 119375 | 119515 |
| exon | 120752 | 120916 |
| exon | 121007 | 121243 |
| exon | 122493 | 123111 |
| CDS | 117883 | 118434 |
| CDS | 119063 | 119281 |
| CDS | 119375 | 119515 |
| CDS | 120752 | 120916 |
| CDS | 121007 | 121243 |
| CDS | 122493 | 122546 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.