PH01001655G0300's details annotation
1.Annotation
ICBR annotation: nucleoside-triphosphatase, putative, expressed
Blast result AT4G19180 : 0.00E+00
Blast annotation: GDA1/CD39 nucleoside phosphatase family protein
2.Location
Scaffold: PH01001655
Strand: -
| Region | Start | End |
| gene | 206472 | 211064 |
| mRNA | 206472 | 211064 |
| exon | 206472 | 207188 |
| exon | 207761 | 211064 |
| CDS | 206902 | 207188 |
| CDS | 207761 | 209591 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001268 | protein catabolic process, |
| coexpression network | CFinderM001526 | protein catabolic process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01150.16 | GDA1_CD39 | 95 | 524 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016787 | hydrolase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.