PH01001660G0300's details annotation
1.Annotation
ICBR annotation: serine esterase family protein, putative, expressed
Blast result AT1G58350 : 0.00E+00
Blast annotation: Putative serine esterase family protein
2.Location
Scaffold: PH01001660
Strand: -
| Region | Start | End |
| gene | 190220 | 196757 |
| mRNA | 190220 | 196757 |
| exon | 190220 | 190584 |
| exon | 190733 | 190783 |
| exon | 190896 | 191101 |
| exon | 191182 | 191440 |
| exon | 191574 | 191696 |
| exon | 191756 | 191791 |
| exon | 191859 | 191918 |
| exon | 192106 | 192226 |
| exon | 192385 | 192518 |
| exon | 192606 | 192869 |
| exon | 193169 | 193369 |
| exon | 193897 | 194083 |
| exon | 194211 | 194275 |
| exon | 194363 | 194517 |
| exon | 195371 | 195456 |
| exon | 196002 | 196757 |
| CDS | 190294 | 190584 |
| CDS | 190733 | 190783 |
| CDS | 190896 | 191101 |
| CDS | 191182 | 191440 |
| CDS | 191574 | 191696 |
| CDS | 191756 | 191791 |
| CDS | 191859 | 191918 |
| CDS | 192106 | 192226 |
| CDS | 192385 | 192518 |
| CDS | 192606 | 192869 |
| CDS | 193169 | 193369 |
| CDS | 193897 | 194083 |
| CDS | 194211 | 194275 |
| CDS | 194363 | 194517 |
| CDS | 195371 | 195456 |
| CDS | 196002 | 196231 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12394.7 | DUF3657 | 166 | 229 |
| PF05057.13 | DUF676 | 555 | 734 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.