PH01001681G0390's details annotation
1.Annotation
ICBR annotation: pattern formation protein EMB30, putative, expressed
Blast result AT1G13980 : 0.00E+00
Blast annotation: sec7 domain-containing protein
2.Location
Scaffold: PH01001681
Strand: -
| Region | Start | End |
| gene | 288059 | 292210 |
| mRNA | 288059 | 292210 |
| exon | 288059 | 292210 |
| CDS | 288569 | 292078 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12783.6 | Sec7_N | 47 | 199 |
| PF01369.19 | Sec7 | 285 | 468 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005086 | ARF guanyl-nucleotide exchange factor activity |
| GO:0005488 | binding |
| GO:0032012 | regulation of ARF protein signal transduction |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.