PH01001683G0210's details annotation
1.Annotation
ICBR annotation: pyruvate kinase, putative, expressed
Blast result AT1G32440 : 0.00E+00
Blast annotation: plastidial pyruvate kinase 3
2.Location
Scaffold: PH01001683
Strand: -
| Region | Start | End |
| gene | 153901 | 159754 |
| mRNA | 153901 | 159754 |
| exon | 153901 | 155185 |
| exon | 155346 | 155438 |
| exon | 155574 | 155682 |
| exon | 155865 | 156040 |
| exon | 156182 | 156284 |
| exon | 156487 | 156662 |
| exon | 156808 | 156870 |
| exon | 157186 | 157274 |
| exon | 157362 | 157472 |
| exon | 157551 | 157685 |
| exon | 158004 | 158169 |
| exon | 158246 | 158509 |
| exon | 159424 | 159754 |
| CDS | 154919 | 155185 |
| CDS | 155346 | 155438 |
| CDS | 155574 | 155682 |
| CDS | 155865 | 156040 |
| CDS | 156182 | 156284 |
| CDS | 156487 | 156662 |
| CDS | 156808 | 156870 |
| CDS | 157186 | 157274 |
| CDS | 157362 | 157472 |
| CDS | 157551 | 157685 |
| CDS | 158004 | 158169 |
| CDS | 158246 | 158509 |
| CDS | 159424 | 159606 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00224.20 | PK | 81 | 418 |
| PF02887.15 | PK_C | 452 | 541 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Glycolysis / Gluconeogenesis | pyruvate kinase [EC:2.7.1.40] | ko00010 | K00873 |
| Pyruvate metabolism | pyruvate kinase [EC:2.7.1.40] | ko00620 | K00873 |
| Carbon fixation in photosynthetic organisms | pyruvate kinase [EC:2.7.1.40] | ko00710 | K00873 |
| Purine metabolism | pyruvate kinase [EC:2.7.1.40] | ko00230 | K00873 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0000287 | magnesium ion binding |
| GO:0003824 | catalytic activity |
| GO:0004743 | pyruvate kinase activity |
| GO:0006096 | glycolysis |
| GO:0030955 | potassium ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.