PH01001696G0150's details annotation
1.Annotation
ICBR annotation: SSA2 - 2S albumin seed storage family protein precursor, putative, expressed
Blast result AT1G47640 : 9.30E-72
Blast annotation: -
2.Location
Scaffold: PH01001696
Strand: +
| Region | Start | End |
| gene | 112148 | 115154 |
| mRNA | 112148 | 115154 |
| exon | 112148 | 112543 |
| exon | 113448 | 113512 |
| exon | 114099 | 114158 |
| exon | 114246 | 115154 |
| CDS | 112243 | 112543 |
| CDS | 113448 | 113512 |
| CDS | 114099 | 114158 |
| CDS | 114246 | 114398 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF09767.8 | DUF2053 | 1 | 90 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.