Annotation of co-expression genes

PH01001699G0440's details annotation

1.Annotation

ICBR annotation: S-locus-like receptor protein kinase, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01001699
Strand: +

RegionStartEnd
gene294328295670
mRNA294328295670
exon294328294664
exon295024295071
exon295233295670
CDS294456294664
CDS295024295071
CDS295233295536

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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