Gene details

Annotation of co-expression genes

PH01001711G0340's details annotation

1.Annotation

ICBR annotation: DNA topoisomerase 2, putative, expressed

Blast result AT3G23890 : 7.00E-112
Blast annotation: topoisomerase II

2.Location

Scaffold: PH01001711
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000663	protein neddylation, RLK-Pelle_RLCK-VIIa-2 (from iTAK) chromosome, DNA topological change, DNA metabolic process, apoplast, cellular protein modification process, Ubiquitin_mediated_proteolysis small protein activating enzyme activity, DNA topoisomerase (ATP-hydrolyzing) activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00521.19	DNA_topoisoIV	10	383

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003677	DNA binding
GO:0003918	DNA topoisomerase type II (ATP-hydrolyzing) activity
GO:0005524	ATP binding
GO:0005694	chromosome
GO:0006259	DNA metabolic process
GO:0006265	DNA topological change

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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