PH01001724G0360's details annotation
1.Annotation
ICBR annotation: cytochrome P450, putative, expressed
Blast result AT2G40890 : 0.00E+00
Blast annotation: cytochrome P450, family 98, subfamily A, polypeptide 3
2.Location
Scaffold: PH01001724
Strand: +
| Region | Start | End |
| gene | 220013 | 225561 |
| mRNA | 220013 | 225561 |
| exon | 220013 | 220574 |
| exon | 223307 | 223701 |
| exon | 224279 | 225561 |
| CDS | 220082 | 220574 |
| CDS | 223307 | 223701 |
| CDS | 224279 | 224926 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000182 | 3-deoxy-7-phosphoheptulonate synthase activity, aromatic amino acid family biosynthetic process, Stilbenoid,_diarylheptanoid_and_gingerol_biosynthesis Phenylalanine,_tyrosine_and_tryptophan_biosynthesis sphingolipid metabolic process, glucosylceramide catabolic process, GH116 Glycoside_Hydrolases Flavonoid_biosynthesis |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00067.21 | p450 | 31 | 478 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Phenylpropanoid biosynthesis | coumaroylquinate(coumaroylshikimate) 3'-monooxygenase [EC:1.14.13.36] | ko00940 | K09754 |
| 959 Stilbenoid, diarylheptanoid and gingerol biosynthesis | coumaroylquinate(coumaroylshikimate) 3'-monooxygenase [EC:1.14.13.36] | K09754 | |
| Flavonoid biosynthesis | coumaroylquinate(coumaroylshikimate) 3'-monooxygenase [EC:1.14.13.36] | ko00941 | K09754 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005506 | iron ion binding |
| GO:0009055 | electron carrier activity |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.