PH01001737G0080's details annotation 1.Annotation ICBR annotation: OsWRKY24 - Superfamily of TFs having WRKY and zinc finger domains, expressed
Blast result AT2G38470 : 1.50E-88 Blast annotation: WRKY DNA-binding protein 33 2.Location Scaffold: PH01001737 Strand: + Region | Start | End | gene | 40662 | 45059 | mRNA | 40662 | 45059 | exon | 40662 | 42458 | exon | 42683 | 42889 | exon | 43119 | 43699 | exon | 43796 | 43957 | exon | 44074 | 45059 | CDS | 42192 | 42458 | CDS | 42683 | 42889 | CDS | 43119 | 43699 | CDS | 43796 | 43957 | CDS | 44074 | 44563 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000016 | protein phosphorylation, protein kinase activity, transferase activity, transferring phosphorus-containing groups, protein serine/threonine kinase activity, ATP binding, RLK-Pelle_LRR-XII-1 (from iTAK) RLK-Pelle_DLSV (from iTAK) RLK-Pelle_WAK (from iTAK) ADP_binding polysaccharide_binding transmembrane_transporter_activity WRKY Transcription_Regulator(from PlantTFDB) recognition of pollen, transmembrane transport, defense response, RLK-Pelle_L-LEC (from iTAK) membrane, integral to membrane, RLK-Pelle_SD-2b (from iTAK) RLK-Pelle_WAK_LRK10L-1 (from iTAK) ATPase activity, substrate-specific transmembrane transporter activity, RLK-Pelle_LRR-XI-1 (from iTAK) 6-phosphofructokinase complex,
| coexpression network | CFinderM001064 | protein phosphorylation, protein kinase activity, transferase activity, transferring phosphorus-containing groups, RLK-Pelle_L-LEC (from iTAK) RLK-Pelle_LRR-III (from iTAK) RLK-Pelle_WAK (from iTAK) WRKY Transcription_Regulator(from PlantTFDB)
|
5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family Category | Family | Transcription_Regulator(from iTAK) | WRKY | Transcription_Regulator(from PlantTFDB) | WRKY |
8.Protein domain
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0003700 | sequence-specific DNA binding transcription factor activity | GO:0006355 | regulation of transcription, DNA-dependent | GO:0043565 | sequence-specific DNA binding |
|