PH01001739G0320's details annotation
1.Annotation
ICBR annotation: BTBA3 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed
Blast result AT2G41370 : 3.00E-115
Blast annotation: Ankyrin repeat family protein / BTB/POZ domain-containing protein
2.Location
Scaffold: PH01001739
Strand: -
| Region | Start | End |
| gene | 263420 | 264535 |
| mRNA | 263420 | 264535 |
| exon | 263420 | 264535 |
| CDS | 263468 | 264451 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF11900.7 | DUF3420 | 37 | 99 |
| PF12796.6 | Ank_2 | 105 | 187 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Plant hormone signal transduction | regulatory protein NPR1 | ko04075 | K14508 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.