PH01001740G0240's details annotation
1.Annotation
ICBR annotation: jacalin-like lectin domain containing protein, expressed
Blast result AT1G73040 : 1.10E-47
Blast annotation: Mannose-binding lectin superfamily protein
2.Location
Scaffold: PH01001740
Strand: -
| Region | Start | End |
| gene | 173332 | 178896 |
| mRNA | 173332 | 178896 |
| exon | 173332 | 174017 |
| exon | 174245 | 174598 |
| exon | 174673 | 174900 |
| exon | 176390 | 176434 |
| exon | 176934 | 176978 |
| exon | 178435 | 178896 |
| CDS | 173778 | 174017 |
| CDS | 174245 | 174598 |
| CDS | 174673 | 174900 |
| CDS | 176390 | 176434 |
| CDS | 176934 | 176978 |
| CDS | 178435 | 178509 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000200 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01419.16 | Jacalin | 80 | 211 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.