PH01001742G0260's details annotation
1.Annotation
ICBR annotation: mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed
Blast result AT3G03070 : 4.80E-36
Blast annotation: NADH-ubiquinone oxidoreductase-related
2.Location
Scaffold: PH01001742
Strand: +
| Region | Start | End |
| gene | 221430 | 226710 |
| mRNA | 221430 | 226710 |
| exon | 221430 | 223414 |
| exon | 225082 | 225166 |
| exon | 225306 | 226710 |
| CDS | 223268 | 223414 |
| CDS | 225082 | 225166 |
| CDS | 225306 | 225415 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10276.8 | zf-CHCC | 70 | 107 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Oxidative phosphorylation | NADH dehydrogenase (ubiquinone) Fe-S protein 6 [EC:1.6.5.3;EC:1.6.99.3] | ko00190 | K03939 |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.