PH01001785G0130's details annotation
1.Annotation
ICBR annotation: exostosin family protein, putative, expressed
Blast result AT5G20260 : 1.00E-102
Blast annotation: Exostosin family protein
2.Location
Scaffold: PH01001785
Strand: +
| Region | Start | End |
| gene | 65109 | 71543 |
| mRNA | 65109 | 71543 |
| exon | 65109 | 65815 |
| exon | 67008 | 67213 |
| exon | 68902 | 69256 |
| exon | 70103 | 71543 |
| CDS | 65558 | 65815 |
| CDS | 67008 | 67213 |
| CDS | 68902 | 69256 |
| CDS | 70103 | 70801 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| GlycosylTransferases | GT47 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03016.14 | Exostosin | 161 | 453 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.