PH01001788G0170's details annotation
1.Annotation
ICBR annotation: GLTP domain containing protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001788
Strand: +
| Region | Start | End |
| gene | 191507 | 198421 |
| mRNA | 191507 | 198421 |
| exon | 191507 | 193710 |
| exon | 193814 | 194039 |
| exon | 194579 | 194692 |
| exon | 194850 | 194978 |
| exon | 195398 | 195427 |
| exon | 196158 | 196294 |
| exon | 196495 | 196643 |
| exon | 197275 | 197411 |
| exon | 197774 | 198421 |
| CDS | 193568 | 193710 |
| CDS | 193814 | 194039 |
| CDS | 194579 | 194692 |
| CDS | 194850 | 194978 |
| CDS | 195398 | 195427 |
| CDS | 196158 | 196294 |
| CDS | 196495 | 196643 |
| CDS | 197275 | 197411 |
| CDS | 197774 | 197914 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10607.8 | CLTH | 161 | 202 |
| PF03662.13 | Glyco_hydro_79n | 259 | 309 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016020 | membrane |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.