PH01001795G0440's details annotation
1.Annotation
ICBR annotation: transporter, major facilitator family, putative, expressed
Blast result AT5G44370 : 9.00E-155
Blast annotation: phosphate transporter 4;6
2.Location
Scaffold: PH01001795
Strand: -
| Region | Start | End |
| gene | 255442 | 258269 |
| mRNA | 255442 | 258269 |
| exon | 255442 | 256562 |
| exon | 256677 | 256908 |
| exon | 256969 | 257039 |
| exon | 257460 | 258269 |
| CDS | 255589 | 256562 |
| CDS | 256677 | 256908 |
| CDS | 256969 | 257039 |
| CDS | 257460 | 257490 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001564 | Oxidative_phosphorylation glycopeptide_alpha-N-acetylgalactosaminidase_activity inorganic diphosphatase activity, phosphate-containing compound metabolic process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07690.15 | MFS_1 | 112 | 382 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
| GO:0055085 | transmembrane transport |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.