PH01001822G0100's details annotation
1.Annotation
ICBR annotation: exportin 1, putative
Blast result AT1G12930 : 4.30E-67
Blast annotation: ARM repeat superfamily protein
2.Location
Scaffold: PH01001822
Strand: +
| Region | Start | End |
| gene | 68661 | 76653 |
| mRNA | 68661 | 76653 |
| exon | 68661 | 70440 |
| exon | 70722 | 70781 |
| exon | 71658 | 71786 |
| exon | 72263 | 72324 |
| exon | 73337 | 73457 |
| exon | 73702 | 73833 |
| exon | 75126 | 75206 |
| exon | 76033 | 76146 |
| exon | 76256 | 76335 |
| exon | 76451 | 76653 |
| CDS | 70006 | 70440 |
| CDS | 70722 | 70781 |
| CDS | 71658 | 71786 |
| CDS | 72263 | 72324 |
| CDS | 73337 | 73457 |
| CDS | 73702 | 73833 |
| CDS | 75126 | 75206 |
| CDS | 76033 | 76146 |
| CDS | 76256 | 76335 |
| CDS | 76451 | 76499 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08389.11 | Xpo1 | 36 | 153 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.