PH01001870G0200's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT3G07570 : 5.10E-80
Blast annotation: Cytochrome b561/ferric reductase transmembrane with DOMON related domain
2.Location
Scaffold: PH01001870
Strand: -
| Region | Start | End |
| gene | 130789 | 133909 |
| mRNA | 130789 | 133909 |
| exon | 130789 | 131938 |
| exon | 132464 | 132759 |
| exon | 132856 | 133252 |
| exon | 133587 | 133909 |
| CDS | 131702 | 131938 |
| CDS | 132464 | 132759 |
| CDS | 132856 | 133252 |
| CDS | 133587 | 133763 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03351.16 | DOMON | 68 | 118 |
| PF03188.15 | Cytochrom_B561 | 211 | 332 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.