PH01001883G0250's details annotation
1.Annotation
ICBR annotation: rhodanese-like domain containing protein, putative, expressed
Blast result AT2G40760 : 5.40E-96
Blast annotation: Rhodanese/Cell cycle control phosphatase superfamily protein
2.Location
Scaffold: PH01001883
Strand: -
| Region | Start | End |
| gene | 163890 | 169185 |
| mRNA | 163890 | 169185 |
| exon | 163890 | 164920 |
| exon | 166041 | 166325 |
| exon | 166436 | 166534 |
| exon | 166635 | 166886 |
| exon | 168604 | 169185 |
| CDS | 164621 | 164920 |
| CDS | 166041 | 166325 |
| CDS | 166436 | 166534 |
| CDS | 166635 | 166886 |
| CDS | 168604 | 168939 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.